The pattern of interest can be specified in any of the two formats:
- REBASE® GCG® format(restriction enzymes)
Paste in the " REBASE® " window the list of patterns that you want to use, using the REBASE®
format. The Restriction Enzyme Database, is a collection of information about restriction enzymes, methylases, the microorganisms from which they have been
isolated, recognition sequences, cleavage sites, methylation specificity, the commercial availability of the enzymes, and references - both published and
unpublished observations (dating back to 1952). It is freely available from vent.neb.com and
its Author is reachable by email:firstname.lastname@example.org. The format of the REBASE® database to paste
is the GCG® format, and it had been chosen since in this way makes very simple to use it directly
on your desktop. In the present distribution the complete REBASE® site database is distributed.
- FINDPATTERN GCG® format(binding sites, motifs)
Paste in the " FINDPATTERN " window the pattern or patterns
that you are looking for, using the notation adopted by the GCG® FINDPATTERN program.
Again, the reason for using a already known format is to facilitate the User in performing his /her
job recycling his /her own data without further manipulation needs.
In this distribution are included the following pattern files: