FASTA BLAST Scan 09-01-2009




FASTA BLAST Scan is a program for processing nucleotide sequences alignment made with FASTA and BLAST alignment tools.


FASTA BLAST Scan is released under the GNU General Public License (GPL)
If you find it useful, please send me a nice postcard





FASTA BLAST Scan's features

Input

FASTA BLAST Scan can process two types of nucleotide alignment:

FASTA BLAST Scan is compatible with the following versions of FASTA and BLAST:

FASTA program from "Pearson package" at ftp://ftp.virginia.edu/pub/fasta (versions 3.1, 3.2, 3.3t07 and 3.4t10)

BLASTN from NCBI server (http://www.ncbi.nlm.nih.gov/BLAST/) (version 2.2.6 [Apr-09-2003])

The maximum number of sequences in alignment is 10000.


Output

The selected sequences can be saved in:

Multi-sequence FASTA format that can be directly aligned with the CLUSTALW program
Example


Query anchored format
Example


FASTA_BLAST Scan screenshot  (21 Kb)

Download

The current version is 2.1


Download FASTA BLAST Scan for Microsoft-WindowsFASTA BLAST Scan for Microsoft-Windows (zip file - (344 Kb))
md5sum: b468cf80b45da91fc8fe4cd3d35cfbf4
Download FASTA BLAST Scan (auto-install file)FASTA BLAST Scan for Microsoft-Windows (auto-install file - (677 Kb))
md5sum: b2fdf23bbe52255f5cf71013022d0575
Download sources of FASTA BLAST ScanSources of FASTA BLAST Scan (zip file - (28 Kb))
md5sum: 8decc0f64afe350fad72ef9eddeb6c5d

To install FASTA BLAST Scan for Microsoft-Windows, extract the ZIP file into a new directory.
To run FASTA BLAST Scan, click twice the "fasta_blast_scan-2.1.exe" file.

For old users of FASTA BLAST Scan:
The Qt library (qtintf.dll) required for the previous version (CLX) is not more necessary
If you do not use other CLX program you can remove it from your system
Tux I am very sad but the Linux version of FASTA BLAST Scan is not more available because it is too difficult to maintain on all Linux distributions




System's requirement

Windows logo
FASTA BLAST Scan for Microsoft Windows runs under Windows 95/98/98SE/ME/NT4/2000/XP


Contacts

For any bug report, comment or suggestion: