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Module: Applications Bio/Emboss/Applications.py

Code to interact with and run various EMBOSS programs.

These classes follow the AbstractCommandline interfaces for running programs.

Imported modules   
from Bio import Application
from Bio.Application import _Option
Classes   
EConsenseCommandline

Commandline object for the econsense program from EMBOSS.

ENeighborCommandline

Commandline object for the eneighbor program from EMBOSS.

EProtDistCommandline

Commandline object for the eprotdist program from EMBOSS.

EProtParsCommandline

Commandline object for the eprotpars program from EMBOSS.

ESeqBootCommandline

Commandline object for the eseqboot program from EMBOSS.

Primer3Commandline

Commandline object for the Primer3 interface from EMBOSS.

PrimerSearchCommandline

Commandline object for the primersearch program from EMBOSS.

WaterCommandline

Commandline object for the water program from EMBOSS.


Table of Contents

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