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Methods
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__getitem__
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__getitem__ ( self, id )
__getitem__(id) -> object Return the GenBank entry. id is the GenBank ID (gi) of the
entry. Raises a KeyError if there's an error.
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Exceptions
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KeyError, "Empty information returned."
KeyError, "I unexpectedly got back html-formatted data."
KeyError, line
KeyError, x
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__init__
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__init__ (
self,
database='Nucleotide',
delay=5.0,
parser=None,
)
NCBIDictionary([database][, delay][, parser])
Create a new Dictionary to access GenBank. database should be
either Nucleotide or Protein. delay is the number of
seconds to wait between each query (5 default). parser is an
optional parser object to change the results into another
form. If unspecified, then the raw contents of the file will
be returned.
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Exceptions
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ValueError, "database should be 'Nucleotide' or 'Protein'."
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__len__
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__len__ ( self )
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Exceptions
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NotImplementedError, "GenBank contains lots of entries"
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__setitem__
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__setitem__ (
self,
key,
item,
)
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Exceptions
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NotImplementedError, "This is a read-only dictionary"
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clear
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clear ( self )
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Exceptions
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NotImplementedError, "This is a read-only dictionary"
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copy
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copy ( self )
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Exceptions
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NotImplementedError, "You don't need to do this..."
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get
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get (
self,
id,
failobj=None,
)
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has_key
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has_key ( self, id )
has_key(id) -> bool
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items
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items ( self )
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Exceptions
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NotImplementedError, "You don't really want to do this..."
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keys
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keys ( self )
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Exceptions
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NotImplementedError, "You don't really want to do this..."
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update
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update ( self )
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Exceptions
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NotImplementedError, "This is a read-only dictionary"
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values
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values ( self )
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Exceptions
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NotImplementedError, "You don't really want to do this..."
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