Table of Contents

Module: __init__ Bio/Geo/__init__.py
Imported modules   
from Bio import File
from Bio.Align.Generic import Alignment
import Bio.Alphabet
from Bio.ParserSupport import EventGenerator, AbstractConsumer
import Martel
from Martel import RecordReader, Dispatch
import Record
import array
import copy
import geo_format
import os
import re
import sgmllib
import string
import urlparse
from xml.sax import handler
Classes   
Error
GeoError

message - description of error

Iterator

Iterator interface to move over a file of Geo entries one at a time.

RecordParser

Parse GEO files into Record objects

_RecordConsumer

Create a Saf Record object from scanner generated information.

_Scanner

Start up Martel to do the scanning of the file.


Table of Contents

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