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Module: DynamicProgramming Bio/HMM/DynamicProgramming.py

Dynamic Programming algorithms for general usage.

This module contains classes which implement Dynamic Programming algorithms that can be used generally.

Classes   
AbstractDPAlgorithms

An abstract class to calculate forward and backward probabiliies.

LogDPAlgorithms

Implement forward and backward algorithms using a log approach.

ScaledDPAlgorithms

Implement forward and backward algorithms using a rescaling approach.

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