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Imported modules
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import BaseDB
import Bio
import Location
import bisect
import os
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Functions
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_find_entry
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_find_entry ( filename, wantword )
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_find_range
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_find_range ( filename, wantword )
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_get_first_words
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_get_first_words ( filename )
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_lookup_alias
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_lookup_alias ( id_filename, word )
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_lookup_location
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_lookup_location ( key_filename, word )
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_parse_primary_table_entry
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_parse_primary_table_entry ( s )
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_parse_secondary_table_entry
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_parse_secondary_table_entry ( s )
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_read_primary_table
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_read_primary_table ( filename )
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_read_secondary_table
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_read_secondary_table ( filename )
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_write_primary_table
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_write_primary_table ( filename, primary_table )
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Exceptions
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AssertionError("Primary index record too large for format spec! " + " %s bytes in %r" %( n, s ) )
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_write_secondary_table
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_write_secondary_table ( filename, table )
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Exceptions
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AssertionError("Secondary index record too large for format spec! " + " %s bytes in %r" %( n, s ) )
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create
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create (
dbname,
primary_namespace,
secondary_namespaces,
formatname="unknown",
)
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open
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open ( dbname, mode="r" )
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Exceptions
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TypeError( "Must call FlatDB.create to create the database" )
TypeError("Unknown mode: %r" %( mode, ) )
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Classes
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