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Represents a residue. A Residue object stores atoms.
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Methods
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__init__
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__init__ (
self,
id,
resname,
segid,
)
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__repr__
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__repr__ ( self )
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_sort
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_sort (
self,
a1,
a2,
)
Sort the Atom objects.
Atoms are sorted alphabetically according to their name,
but N, CA, C, O always come first.
Arguments:
o a1, a2 - Atom objects
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add
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add ( self, atom )
Add an Atom object.
Checks for adding duplicate atoms, and raises a
PDBConstructionException if so.
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Exceptions
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PDBConstructionException, "Atom %s defined twice in residue %s" %( atom_id, self )
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flag_disordered
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flag_disordered ( self )
Set the disordered flag.
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get_resname
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get_resname ( self )
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get_segid
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get_segid ( self )
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get_unpacked_list
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get_unpacked_list ( self )
Returns the list of all atoms, unpack DisorderedAtoms."
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is_disordered
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is_disordered ( self )
Return 1 if the residue contains disordered atoms.
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sort
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sort ( self )
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