The entire SCOP hierarchy.
- root
- The root node of the hierarchy
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Methods
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__init__
getDomainBySid
write_cla
write_des
write_hie
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__init__
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__init__ (
self,
cla_handle=None,
des_handle=None,
hie_handle=None,
)
Build the SCOP hierarchy from the SCOP parsable files.
If no file handles are given, then a Scop object with a single
empty root node is returned.
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Exceptions
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RuntimeError, "Need CLA, DES and HIE files to build SCOP"
SyntaxError, "Incomplete data?"
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getDomainBySid
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getDomainBySid ( self, sid )
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write_cla
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write_cla ( self, handle )
Build a CLA SCOP parsable file from this object
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write_des
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write_des ( self, handle )
Build a DES SCOP parsable file from this object
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write_hie
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write_hie ( self, handle )
Build an HIE SCOP parsable file from this object
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