Table of Contents

Module: saf_format Bio/Saf/saf_format.py

Martel based parser to read SAF formatted files.

This is a huge regular regular expression for SAF, built using the regular expressiona on steroids capabilities of Martel.

http://www.embl-heidelberg.de/predictprotein/Dexa/optin_safDes.html

Notes: Just so I remember -- the new end of line syntax is: New regexp syntax - \R \R means "\n|\r\n?" [\R] means "[\n\r]"

This helps us have endlines be consistent across platforms.

Imported modules   
import Martel
from Martel import RecordReader, Str, AnyEol, ToEol, Group, Alt, Rep, Rep1, Any, AnyBut, RepN, Opt, ToSep
from Martel.Expression import Assert
import string

Table of Contents

This document was automatically generated on Mon Jul 1 12:03:20 2002 by HappyDoc version 2.0.1