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Class: Record Bio/SwissProt/SProt.py

Holds information from a SwissProt record.

Members: entry_name Name of this entry, e.g. RL1_ECOLI. data_class Either STANDARD or PRELIMINARY. molecule_type Type of molecule, PRT, sequence_length Number of residues.

accessions List of the accession numbers, e.g. ['P00321'] created A tuple of (date, release). sequence_update A tuple of (date, release). annotation_update A tuple of (date, release).

description Free-format description. gene_name Gene name. See userman.txt for description. organism The source of the sequence. organelle The origin of the sequence. organism_classification The taxonomy classification. List of strings. (http://www.ncbi.nlm.nih.gov/Taxonomy/) taxonomy_id A list of NCBI taxonomy id's. references List of Reference objects. comments List of strings. cross_references List of tuples (db, id1[, id2][, id3]). See the docs. keywords List of the keywords. features List of tuples (key name, from, to, description). from and to can be either integers for the residue numbers, <, >, or ?

seqinfo tuple of (length, molecular weight, CRC32 value) sequence The sequence.

Methods   
__init__
  __init__ 
__init__ ( self )


Table of Contents

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