Module: __init_

Module: __init__

Bio/Tools/KDTree/__init__.py

Imported modules

from Bio.Tools.KDTree import _KDTree

Functions

_dist

_dist ( p,  q )

_neighbor_test

_neighbor_test (
        nr_points,
        dim,
        bucket_size,
        radius,
        )

Test all fixed radius neighbor search using the KD tree C module.

nr_points - number of points used in test o dim - dimension of coords o bucket_size - nr of points per tree node o radius - radius of search (typically 0.05 or so)

_test

_test (
        nr_points,
        dim,
        bucket_size,
        radius,
        )

Test neighbor search using the KD tree C module.

nr_points - number of points used in test o dim - dimension of coords o bucket_size - nr of points per tree node o radius - radius of search (typically 0.05 or so)

Classes

KD tree implementation (C++, SWIG python wrapper)

This document was automatically generated on Mon Jul 1 12:03:06 2002 by HappyDoc version 2.0.1