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  • CD-HIT: Sequence clustering software - Support tickets

    Submit | Open tickets | Closed tickets

    [ Ticket #1192 ] CD-HIT runtime
    Date:
    06/04/14 14:12
    Submitted by:
    dilipdurai
    Assigned to:
    unset
    Category:
    Clustering
    Priority:
    5
    Ticket group:
    Critical
    Resolution:
    Unset
    Summary:
    CD-HIT runtime
    Original submission:
    Hi
    When I try to run CD-HIT-est on certain sequences the program takes forever and the following line is displayed :
    "comparing sequences from 0 to 0"
    I tried to reduce the number sequences (to 10) but still it doesnt work.

    cheers
    Dilip
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