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  • BIRCH: Comprehensive bioinfo. system - Support tickets

    Submit | Open tickets | Closed tickets

    [ Ticket #1221 ] BioLegato : trouble with large sequences?
    Date:
    06/20/19 13:30
    Submitted by:
    B_Fristensky
    Assigned to:
    B_Fristensky
    Category:
    bioLegato
    Priority:
    6
    Ticket group:
    bioLegato
    Resolution:
    Not Resolved
    Summary:
    BioLegato : trouble with large sequences?
    Original submission:
    Example: Nucleotide seq. CP002684, A. thaliana chromosome 1.

    When downloaded from NCBI's browser, this sequence is correctly saved to a GenBank file about 98 Mb. When retrieved using blnfetch, the entry is truncated and annotation appears in the bldna sequence canvas.

    This could be a bug in BioLegato, the PCD shell command, or even in Eutils.
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    Ticket change history
    Field Old value Date By
    status_id Pending 06/20/19 13:30 B_Fristensky
    priority 5 06/20/19 13:30 B_Fristensky
    assigned_to unset 06/20/19 13:30 B_Fristensky
    resolution_id Unset 06/20/19 13:30 B_Fristensky

     

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