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root/Genquire/sample_contig.gff
Revision: 1.1.1.1 (vendor branch)
Committed: Fri Nov 2 17:13:55 2001 UTC (14 years, 6 months ago) by markw
Branch: MAIN
CVS Tags: Release4, HEAD, HEAD_NEW, HEAD
Changes since 1.1: +0 -0 lines
Log Message:
Starting Genquire project

Line File contents
1 test1 GeneMarkHMM init 46357 46704 0 + .
2 test1 GeneMarkHMM term 9408 9605 0 - .
3 test1 GeneMarkHMM intr 46830 46886 0 + .
4 test1 GeneMarkHMM intr 9694 9840 0 - .
5 test1 GeneMarkHMM intr 46979 47041 0 + .
6 test1 GeneMarkHMM intr 9918 10174 0 - .
7 test1 GeneMarkHMM intr 47129 47185 0 + .
8 test1 GeneMarkHMM init 10350 10557 0 - .
9 test1 GeneMarkHMM intr 47506 47589 0 + .
10 test1 GeneMarkHMM sngl 12272 13042 0 - .
11 test1 GeneMarkHMM term 13640 13716 0 - .
12 test1 MZEF intr 29275 29459 966 - .
13 test1 MZEF intr 28814 28985 992 - .
14 test1 MZEF intr 26564 26705 706 - .
15 test1 MZEF intr 25492 25546 631 - .
16 test1 MZEF intr 21037 21081 999 - .
17 test1 MZEF intr 20868 21022 635 - .
18 test1 MZEF intr 20596 20683 1000 - .
19 test1 MZEF intr 20253 20384 996 - .
20 test1 GeneMarkHMM intr 47975 48043 0 + .
21 test1 MZEF intr 19956 20179 999 - .
22 test1 GeneMarkHMM intr 48121 48233 0 + .
23 test1 MZEF intr 19798 19859 935 - .
24 test1 GeneMarkHMM intr 48322 48491 0 + .
25 test1 GeneMarkHMM intr 48638 48716 0 + .
26 test1 GeneMarkHMM term 48885 48990 0 + .
27 test1 GeneMarkHMM term 49620 49712 0 - .
28 test1 GeneMarkHMM intr 49836 49904 0 - .
29 test1 GeneMarkHMM intr 49980 50060 0 - .
30 test1 GeneMarkHMM intr 50146 50190 0 - .
31 test1 GeneMarkHMM intr 50285 50342 0 - .
32 test1 Genscan intr 23067 23194 565 + 1
33 test1 Genscan intr 23639 23695 510 + 1
34 test1 Genscan intr 23904 24027 488 + 2
35 test1 Genscan intr 24107 24213 485 + 0
36 test1 Genscan intr 24563 24649 606 + 1
37 test1 Genscan intr 24731 24808 923 + 1
38 test1 Genscan intr 24982 25046 998 + 0
39 test1 Genscan intr 25268 25366 964 + 2
40 test1 Genscan intr 25507 25615 911 + 1
41 test1 Genscan intr 25979 26087 947 + 1
42 test1 MZEF intr 19644 19719 942 - .
43 test1 MZEF intr 19410 19554 999 - .
44 test1 MZEF intr 18970 19046 921 - .
45 test1 MZEF intr 18838 18885 1000 - .
46 test1 MZEF intr 15415 15564 998 - .
47 test1 MZEF intr 15169 15322 1000 - .
48 test1 MZEF intr 14467 14682 999 - .
49 test1 MZEF intr 14245 14381 949 - .
50 test1 GeneMarkHMM intr 50440 50562 0 - .
51 test1 MZEF intr 14067 14158 995 - .
52 test1 GeneMarkHMM intr 50803 50906 0 - .
53 test1 MZEF intr 13805 13961 996 - .
54 test1 GeneMarkHMM intr 52089 52361 0 - .
55 test1 MZEF intr 1985 2081 516 + .
56 test1 GeneMarkHMM intr 52465 52618 0 - .
57 test1 MZEF intr 2306 2386 762 + .
58 test1 GeneMarkHMM intr 52956 53110 0 - .
59 test1 GeneMarkHMM init 53151 53270 0 - .
60 test1 Genscan intr 26196 26268 963 + 1
61 test1 Genscan term 27678 27762 598 + 0
62 test1 Genscan plya 27808 27813 0 + .
63 test1 Genscan plya 27944 27949 0 - .
64 test1 Genscan term 28032 28154 696 - 2
65 test1 Genscan intr 28240 28332 750 - 0
66 test1 Genscan intr 28814 28985 849 - 1
67 test1 Genscan intr 29077 29153 989 - 2
68 test1 Genscan intr 29275 29478 487 - 0
69 test1 Genscan intr 29650 29701 456 - 0
70 test1 MZEF intr 13657 13716 887 - .
71 test1 MZEF intr 9694 9840 999 - .
72 test1 MZEF intr 8960 9023 978 - .
73 test1 MZEF intr 13550 13587 916 + .
74 test1 MZEF intr 5439 6376 740 - .
75 test1 MZEF intr 14354 14479 758 + .
76 test1 MZEF intr 3930 4221 999 - .
77 test1 MZEF intr 17102 17314 1000 + .
78 test1 MZEF intr 3332 3641 1000 - .
79 test1 MZEF intr 23067 23194 807 + .
80 test1 MZEF intr 2382 2467 610 - .
81 test1 MZEF intr 23236 23388 826 + .
82 test1 MZEF intr 1541 1890 667 - .
83 test1 MZEF intr 23639 23695 890 + .
84 test1 MZEF intr 23904 24027 721 + .
85 test1 MZEF intr 24084 24213 999 + .
86 test1 MZEF intr 24563 24649 986 + .
87 test1 MZEF intr 24982 25046 987 + .
88 test1 Genscan intr 29728 29837 989 - 2
89 test1 Genscan intr 29941 30000 702 - 0
90 test1 Genscan intr 30110 30183 521 - 1
91 test1 Genscan intr 30293 30416 930 - 2
92 test1 Genscan intr 30502 30579 832 - 0
93 test1 Genscan intr 30676 30782 916 - 0
94 test1 Genscan intr 30866 30970 924 - 2
95 test1 Genscan init 31360 31387 999 - 1
96 test1 Genscan prom 31905 31944 0 - .
97 test1 Genscan prom 34390 34429 0 + .
98 test1 Genscan init 35046 35670 999 + 2
99 test1 Genscan intr 35880 36023 860 + 1
100 test1 Genscan intr 36178 36330 910 + 2
101 test1 Genscan intr 36476 36591 921 + 0
102 test1 Genscan intr 36682 36849 992 + 0
103 test1 Genscan intr 1072 1455 343 - 0
104 test1 Genscan intr 37045 37275 989 + 0
105 test1 Genscan intr 1541 1890 256 - 1
106 test1 Genscan intr 39397 39433 64 + 0
107 test1 Genscan intr 2768 2935 189 - 2
108 test1 Genscan term 40284 40381 66 + 1
109 test1 Genscan intr 3332 3641 999 - 2
110 test1 Genscan plya 41216 41221 0 + .
111 test1 Genscan intr 3930 4221 996 - 2
112 test1 Genscan prom 41608 41647 0 + .
113 test1 Genscan intr 4260 6376 329 - 1
114 test1 Genscan init 41837 42121 370 + 1
115 test1 Genscan init 7252 7362 606 - 0
116 test1 Genscan intr 42473 42552 996 + 1
117 test1 Genscan prom 7768 7807 0 - .
118 test1 Genscan intr 43028 43056 999 + 2
119 test1 Genscan plya 9375 9380 0 - .
120 test1 Genscan intr 43150 43346 988 + 2
121 test1 Genscan term 9408 9581 485 - 2
122 test1 Genscan intr 43557 43778 982 + 2
123 test1 Genscan intr 9694 9840 997 - 0
124 test1 Genscan intr 43848 43985 999 + 2
125 test1 Genscan intr 9918 10174 987 - 2
126 test1 Genscan intr 44077 44193 710 + 0
127 test1 Genscan init 10509 10554 319 - 0
128 test1 Genscan intr 44547 44663 998 + 2
129 test1 Genscan prom 11376 11415 0 - .
130 test1 Genscan term 44746 44898 987 + 0
131 test1 Genscan plya 12001 12006 0 - .
132 test1 Genscan plya 45832 45837 0 + .
133 test1 Genscan term 12272 12912 565 - 1
134 test1 Genscan prom 45934 45973 0 + .
135 test1 Genscan init 46357 46704 844 + 0
136 test1 Genscan intr 13805 13978 878 - 2
137 test1 Genscan intr 46830 46886 983 + 2
138 test1 Genscan intr 14067 14158 947 - 0
139 test1 Genscan intr 47129 47185 548 + 1
140 test1 Genscan intr 14245 14381 921 - 2
141 test1 Genscan intr 47506 47589 977 + 0
142 test1 Genscan intr 14467 14682 996 - 0
143 test1 Genscan intr 47975 48043 718 + 1
144 test1 Genscan intr 15169 15322 752 - 0
145 test1 Genscan intr 48121 48233 934 + 0
146 test1 Genscan init 15415 15551 165 - 2
147 test1 Genscan intr 48322 48491 993 + 1
148 test1 Genscan prom 15846 15885 0 - .
149 test1 Genscan intr 48638 48716 992 + 0
150 test1 Genscan prom 16224 16263 0 + .
151 test1 Genscan term 48885 48990 965 + 0
152 test1 Genscan init 17197 17365 557 + 0
153 test1 Genscan term 17500 17840 996 + 2
154 test1 Genscan plya 49007 49012 0 + .
155 test1 Genscan plya 49077 49082 0 - .
156 test1 Genscan plya 18174 18179 0 + .
157 test1 Genscan term 49620 49712 880 - 2
158 test1 Genscan plya 18251 18256 0 - .
159 test1 Genscan intr 49836 49904 904 - 2
160 test1 Genscan term 18680 18742 557 - 1
161 test1 Genscan intr 49980 50060 999 - 2
162 test1 Genscan intr 18838 18885 770 - 0
163 test1 Genscan intr 50146 50190 504 - 0
164 test1 Genscan intr 18970 19046 969 - 0
165 test1 Genscan intr 50285 50342 999 - 1
166 test1 Genscan intr 19410 19554 999 - 0
167 test1 Genscan intr 50440 50562 980 - 2
168 test1 Genscan intr 19644 19719 621 - 2
169 test1 Genscan intr 50803 50906 783 - 2
170 test1 Genscan intr 19798 19859 620 - 2
171 test1 Genscan intr 51332 51364 733 - 1
172 test1 Genscan intr 20114 20179 972 - 1
173 test1 Genscan intr 20253 20339 990 - 2
174 test1 Genscan intr 52107 52373 449 - 2
175 test1 Genscan init 20428 20463 707 - 0
176 test1 Genscan intr 52465 52618 999 - 0
177 test1 Genscan prom 20648 20687 0 - .
178 test1 Genscan intr 52956 53171 88 - 1
179 test1 Genscan prom 20829 20868 0 + .
180 test1 Genscan intr 53299 53396 100 - 2
181 test1 Genscan init 20908 20938 707 + 0
182 test1 Genscan intr 20981 21165 611 + 0
183 test1 GeneMarkHMM intr 13805 13978 0 - .
184 test1 Genscan intr 21177 21345 333 + 2
185 test1 GeneMarkHMM intr 14067 14158 0 - .
186 test1 Genscan term 21504 21643 739 + 1
187 test1 GeneMarkHMM intr 14245 14381 0 - .
188 test1 Genscan plya 22033 22038 0 + .
189 test1 GeneMarkHMM intr 14467 14682 0 - .
190 test1 Genscan prom 22145 22184 0 + .
191 test1 GeneMarkHMM intr 15169 15322 0 - .
192 test1 Genscan init 22616 22766 987 + 1
193 test1 GeneMarkHMM intr 15415 15564 0 - .
194 test1 GeneMarkHMM intr 15660 15744 0 - .
195 test1 GeneMarkHMM init 15854 15947 0 - .
196 test1 GeneMarkHMM init 17197 17322 0 + .
197 test1 GeneMarkHMM term 17511 17840 0 + .
198 test1 GeneMarkHMM term 18522 18533 0 - .
199 test1 GeneMarkHMM intr 18642 18788 0 - .
200 test1 GeneMarkHMM intr 18838 18885 0 - .
201 test1 GeneMarkHMM intr 18970 19046 0 - .
202 test1 GeneMarkHMM intr 19410 19554 0 - .
203 test1 GeneMarkHMM intr 19644 19719 0 - .
204 test1 GeneMarkHMM intr 19798 19859 0 - .
205 test1 GeneMarkHMM intr 19956 20039 0 - .
206 test1 GeneMarkHMM intr 20114 20179 0 - .
207 test1 GeneMarkHMM intr 20253 20339 0 - .
208 test1 GeneMarkHMM intr 20428 20513 0 - .
209 test1 GeneMarkHMM intr 20596 20683 0 - .
210 test1 GeneMarkHMM intr 20868 20953 0 - .
211 test1 GeneMarkHMM intr 21037 21081 0 - .
212 test1 GeneMarkHMM init 21163 21313 0 - .
213 test1 GeneMarkHMM init 22616 22766 0 + .
214 test1 GeneMarkHMM intr 22902 22976 0 + .
215 test1 GeneMarkHMM intr 23067 23199 0 + .
216 test1 GeneMarkHMM intr 23236 23388 0 + .
217 test1 GeneMarkHMM intr 23481 23526 0 + .
218 test1 MZEF intr 25530 25615 993 + .
219 test1 MZEF intr 25947 26268 978 + .
220 test1 MZEF intr 27139 27249 552 + .
221 test1 MZEF intr 27678 27729 646 + .
222 test1 MZEF intr 35880 36023 684 + .
223 test1 MZEF intr 36178 36330 992 + .
224 test1 GeneMarkHMM intr 23615 23695 0 + .
225 test1 MZEF intr 36476 36591 993 + .
226 test1 GeneMarkHMM intr 23904 24027 0 + .
227 test1 MZEF intr 37045 37275 1000 + .
228 test2 GeneMarkHMM intr 542 721 0 - .
229 test1 GeneMarkHMM intr 24107 24213 0 + .
230 test1 MZEF intr 38175 38202 993 + .
231 test1 GeneMarkHMM intr 24563 24649 0 + .
232 test1 MZEF intr 42523 42552 902 + .
233 test1 GeneMarkHMM intr 24731 24808 0 + .
234 test1 GeneMarkHMM intr 24982 25046 0 + .
235 test1 GeneMarkHMM intr 25268 25366 0 + .
236 test1 GeneMarkHMM intr 25507 25615 0 + .
237 test1 GeneMarkHMM intr 26043 26124 0 + .
238 test1 GeneMarkHMM intr 26211 26268 0 + .
239 test2 GeneMarkHMM intr 804 880 0 - .
240 test2 GeneMarkHMM intr 977 1062 0 - .
241 test1 MZEF intr 43028 43056 999 + .
242 test2 GeneMarkHMM intr 1145 1335 0 - .
243 test1 MZEF intr 43150 43346 951 + .
244 test2 GeneMarkHMM intr 1471 1757 0 - .
245 test1 MZEF intr 43557 43778 964 + .
246 test2 GeneMarkHMM intr 1849 1975 0 - .
247 test1 MZEF intr 44388 44441 688 + .
248 test2 GeneMarkHMM intr 2172 2288 0 - .
249 test1 MZEF intr 44547 44663 999 + .
250 test2 GeneMarkHMM intr 2597 2710 0 - .
251 test1 MZEF intr 46830 46886 1000 + .
252 test2 GeneMarkHMM intr 3169 3340 0 - .
253 test1 MZEF intr 46979 47041 999 + .
254 test1 GeneMarkHMM intr 26601 26685 0 + .
255 test2 GeneMarkHMM intr 4033 4240 0 - .
256 test1 MZEF intr 47129 47185 912 + .
257 test1 GeneMarkHMM term 26792 26890 0 + .
258 test2 GeneMarkHMM init 4365 4710 0 - .
259 test1 MZEF intr 47506 47589 1000 + .
260 test1 GeneMarkHMM init 27021 27072 0 + .
261 test1 MZEF intr 47975 48043 997 + .
262 test1 GeneMarkHMM intr 27139 27249 0 + .
263 test1 GeneMarkHMM term 27344 27471 0 + .
264 test1 GeneMarkHMM term 28032 28154 0 - .
265 test1 GeneMarkHMM intr 28240 28332 0 - .
266 test1 GeneMarkHMM intr 28814 28985 0 - .
267 test1 GeneMarkHMM intr 29077 29153 0 - .
268 test1 GeneMarkHMM intr 29275 29434 0 - .
269 test1 MZEF intr 48095 48210 985 + .
270 test1 MZEF intr 48322 48491 981 + .
271 test1 MZEF intr 48638 48716 995 + .
272 test2 MZEF intr 5994 6059 986 - .
273 test2 MZEF intr 4033 4240 935 - .
274 test1 GeneMarkHMM intr 29728 29837 0 - .
275 test2 MZEF intr 2950 3015 978 - .
276 test1 GeneMarkHMM intr 29941 30000 0 - .
277 test1 GeneMarkHMM intr 30110 30183 0 - .
278 test1 GeneMarkHMM intr 30293 30416 0 - .
279 test1 GeneMarkHMM intr 30502 30579 0 - .
280 test1 GeneMarkHMM intr 30676 30782 0 - .
281 test1 GeneMarkHMM intr 30866 30970 0 - .
282 test1 GeneMarkHMM init 31360 31387 0 - .
283 test1 GeneMarkHMM init 35046 35670 0 + .
284 test1 GeneMarkHMM intr 35880 36023 0 + .
285 test2 Genscan plya 468 473 0 - .
286 test2 MZEF intr 2172 2212 608 - .
287 test2 Genscan term 536 721 568 - 1
288 test2 MZEF intr 1849 1975 802 - .
289 test2 Genscan intr 804 880 983 - 2
290 test2 MZEF intr 977 1062 948 - .
291 test2 Genscan intr 977 1062 999 - 2
292 test2 MZEF intr 804 880 994 - .
293 test2 Genscan intr 1145 1335 784 - 0
294 test2 MZEF intr 542 721 955 - .
295 test2 Genscan intr 1471 1757 916 - 0
296 test2 Genscan intr 1849 1975 934 - 1
297 test2 Genscan intr 2172 2288 935 - 2
298 test1 MZEF intr 52465 52640 946 - .
299 test1 MZEF intr 52089 52408 523 - .
300 test1 MZEF intr 50803 50878 995 - .
301 test1 GeneMarkHMM intr 36178 36330 0 + .
302 test1 MZEF intr 50440 50562 1000 - .
303 test1 GeneMarkHMM intr 36476 36591 0 + .
304 test1 MZEF intr 50285 50342 988 - .
305 test1 GeneMarkHMM intr 36682 36849 0 + .
306 test1 GeneMarkHMM intr 37045 37275 0 + .
307 test1 GeneMarkHMM term 37756 37905 0 + .
308 test1 GeneMarkHMM init 41837 42121 0 + .
309 test1 GeneMarkHMM intr 42500 42552 0 + .
310 test1 GeneMarkHMM intr 43028 43056 0 + .
311 test1 GeneMarkHMM intr 43150 43346 0 + .
312 test1 GeneMarkHMM intr 1072 1455 0 - .
313 test1 GeneMarkHMM intr 43557 43778 0 + .
314 test1 GeneMarkHMM init 1541 1756 0 - .
315 test2 Genscan intr 3169 3299 393 - 0
316 test2 Genscan intr 4148 4240 938 - 2
317 test2 Genscan init 4365 4845 982 - 0
318 test2 MZEF intr 2813 2842 925 + .
319 test1 MZEF intr 50146 50190 952 - .
320 test1 MZEF intr 49980 50060 972 - .
321 test1 MZEF intr 49836 49904 971 - .
322 test1 MZEF intr 30866 30970 979 - .
323 test1 MZEF intr 30676 30782 999 - .
324 test1 MZEF intr 30502 30619 1000 - .
325 test1 MZEF intr 30293 30416 997 - .
326 test1 MZEF intr 30110 30248 834 - .
327 test1 GeneMarkHMM intr 43848 43985 0 + .
328 test1 MZEF intr 29728 29837 999 - .
329 test1 GeneMarkHMM term 2709 2935 0 - .
330 test1 GeneMarkHMM intr 44077 44193 0 + .
331 test1 MZEF intr 29650 29678 875 - .
332 test1 GeneMarkHMM intr 3332 3641 0 - .
333 test1 GeneMarkHMM intr 44388 44441 0 + .
334 test1 GeneMarkHMM intr 3930 4221 0 - .
335 test1 GeneMarkHMM intr 44547 44663 0 + .
336 test1 GeneMarkHMM init 4329 6376 0 - .
337 test1 GeneMarkHMM term 44746 44898 0 + .