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Revision 294 - Directory Listing
Modified Mon Oct 22 18:59:56 2012 UTC (3 years, 8 months ago) by gpertea
added -O option to only output affected reads

Revision 199 - Directory Listing
Modified Mon Mar 5 17:16:24 2012 UTC (4 years, 3 months ago) by gpertea

Revision 192 - Directory Listing
Modified Fri Feb 17 23:43:57 2012 UTC (4 years, 4 months ago) by gpertea

Revision 190 - Directory Listing
Modified Fri Feb 17 23:33:17 2012 UTC (4 years, 4 months ago) by gpertea

Revision 189 - Directory Listing
Modified Fri Feb 17 23:08:53 2012 UTC (4 years, 4 months ago) by gpertea
added -a option to control the minimum exact adaptor match to be trimmed at the ends

Revision 187 - Directory Listing
Modified Fri Feb 17 05:42:21 2012 UTC (4 years, 4 months ago) by gpertea
fqtrim

Revision 185 - Directory Listing
Modified Thu Feb 16 22:05:42 2012 UTC (4 years, 4 months ago) by gpertea

Revision 183 - Directory Listing
Modified Thu Feb 16 21:59:33 2012 UTC (4 years, 4 months ago) by gpertea
works

Revision 182 - Directory Listing
Modified Thu Feb 16 21:33:27 2012 UTC (4 years, 4 months ago) by gpertea

Revision 180 - Directory Listing
Modified Thu Feb 16 21:24:04 2012 UTC (4 years, 4 months ago) by gpertea
works probably

Revision 177 - Directory Listing
Modified Thu Feb 16 07:10:32 2012 UTC (4 years, 4 months ago) by gpertea
collectSeeds unified

Revision 175 - Directory Listing
Modified Thu Feb 16 03:46:59 2012 UTC (4 years, 4 months ago) by gpertea

Revision 172 - Directory Listing
Modified Wed Feb 15 03:33:40 2012 UTC (4 years, 4 months ago) by gpertea
wip fqtrim

Revision 170 - Directory Listing
Modified Tue Feb 14 22:35:51 2012 UTC (4 years, 4 months ago) by gpertea
wip fqtrim

Revision 108 - Directory Listing
Modified Tue Oct 11 19:49:29 2011 UTC (4 years, 8 months ago) by gpertea
made more stringent on the 5' end, other tests and fixes

Revision 105 - Directory Listing
Modified Mon Oct 10 21:44:55 2011 UTC (4 years, 8 months ago) by gpertea
wip - works?

Revision 103 - Directory Listing
Modified Mon Oct 10 19:33:39 2011 UTC (4 years, 8 months ago) by gpertea
wip

Revision 102 - Directory Listing
Modified Fri Oct 7 21:44:59 2011 UTC (4 years, 8 months ago) by gpertea
wip

Revision 98 - Directory Listing
Modified Thu Oct 6 20:49:00 2011 UTC (4 years, 8 months ago) by gpertea
wip

Revision 94 - Directory Listing
Modified Tue Oct 4 21:27:35 2011 UTC (4 years, 8 months ago) by gpertea
wip

Revision 88 - Directory Listing
Modified Mon Oct 3 16:34:03 2011 UTC (4 years, 8 months ago) by gpertea
starting to add polyA/T trimming

Revision 76 - Directory Listing
Modified Tue Sep 27 12:37:02 2011 UTC (4 years, 8 months ago) by gpertea
u

Revision 14 - Directory Listing
Modified Mon Jul 18 20:36:48 2011 UTC (4 years, 11 months ago) by gpertea
added old trimpoly code just for archive

Revision 13 - Directory Listing
Modified Mon Jul 18 20:35:43 2011 UTC (4 years, 11 months ago) by gpertea
sync with my local source

Revision 12 - Directory Listing
Modified Wed Jan 26 19:05:05 2011 UTC (5 years, 4 months ago) by gpertea
added qv-threshold trimming

Revision 11 - Directory Listing
Modified Tue Mar 23 18:03:12 2010 UTC (6 years, 3 months ago) by gpertea
update l5,l3 to defaults if no trimming is performed

Revision 10 - Directory Listing
Modified Tue Mar 23 17:46:56 2010 UTC (6 years, 3 months ago) by gpertea
bugfix: prevent crash with -o option is not given

Revision 9 - Directory Listing
Modified Tue Mar 23 17:12:14 2010 UTC (6 years, 3 months ago) by gpertea
fixed bug causing overtrimming

Revision 4 - Directory Listing
Modified Mon Mar 22 22:05:23 2010 UTC (6 years, 3 months ago) by gpertea
initial commit

Revision 3 - Directory Listing
Added Mon Mar 22 22:04:34 2010 UTC (6 years, 3 months ago) by gpertea
mkdir