 ../
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AceParser.cpp
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16
(9 years ago)
by gpertea:
sync with local source
|
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AceParser.h
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16
(9 years ago)
by gpertea:
sync with local source
|
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GAlnExtend.cpp
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109
(9 years ago)
by gpertea:
added GStr::reverse(), GAlnExtend stringency tweaks
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GAlnExtend.h
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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GArgs.cpp
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16
(9 years ago)
by gpertea:
sync with local source
|
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GArgs.h
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16
(9 years ago)
by gpertea:
sync with local source
|
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GBam.cpp
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133
(9 years ago)
by gpertea:
TODO: detect sam/bam input for samopen
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GBam.h
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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GBase.cpp
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150
(9 years ago)
by gpertea:
fixed parsing bug for extractAttr();
Gstrcmp() and Gstricmp() take a 3rd optional param to make them work like strncmp()
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GBase.h
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150
(9 years ago)
by gpertea:
fixed parsing bug for extractAttr();
Gstrcmp() and Gstricmp() take a 3rd optional param to make them work like strncmp()
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GBitVec.h
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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GCdbYank.cpp
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16
(9 years ago)
by gpertea:
sync with local source
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GCdbYank.h
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16
(9 years ago)
by gpertea:
sync with local source
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GFaSeqGet.cpp
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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GFaSeqGet.h
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153
(9 years ago)
by gpertea:
still working on trans-splicing/fusions in gff
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GFastaFile.h
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16
(9 years ago)
by gpertea:
sync with local source
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GFastaIndex.cpp
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18
(9 years ago)
by gpertea:
added a few more source files, test code
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GFastaIndex.h
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18
(9 years ago)
by gpertea:
added a few more source files, test code
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GHash.hh
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16
(9 years ago)
by gpertea:
sync with local source
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GIntervalTree.cpp
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2
(10 years ago)
by gpertea:
added my gclib source files
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GIntervalTree.h
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2
(10 years ago)
by gpertea:
added my gclib source files
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GList.hh
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151
(9 years ago)
by gpertea:
wip: trans-spliced and fusion transcripts
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GStr.cpp
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109
(9 years ago)
by gpertea:
added GStr::reverse(), GAlnExtend stringency tweaks
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GStr.h
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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GYarn.cpp
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107
(9 years ago)
by gpertea:
wip GYarn (threads)
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GYarn.h
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107
(9 years ago)
by gpertea:
wip GYarn (threads)
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LayoutParser.cpp
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16
(9 years ago)
by gpertea:
sync with local source
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LayoutParser.h
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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Makefile
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18
(9 years ago)
by gpertea:
added a few more source files, test code
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bmsearch.cpp
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99
(9 years ago)
by gpertea:
wip
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bmsearch.h
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99
(9 years ago)
by gpertea:
wip
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codons.cpp
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2
(10 years ago)
by gpertea:
added my gclib source files
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codons.h
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2
(10 years ago)
by gpertea:
added my gclib source files
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gcdb.cpp
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16
(9 years ago)
by gpertea:
sync with local source
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gcdb.h
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16
(9 years ago)
by gpertea:
sync with local source
|
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gdimg.cpp
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2
(10 years ago)
by gpertea:
added my gclib source files
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gdimg.h
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2
(10 years ago)
by gpertea:
added my gclib source files
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gdna.cpp
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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gdna.h
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2
(10 years ago)
by gpertea:
added my gclib source files
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gff.cpp
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153
(9 years ago)
by gpertea:
still working on trans-splicing/fusions in gff
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gff.h
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153
(9 years ago)
by gpertea:
still working on trans-splicing/fusions in gff
|
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gstopwatch.cpp
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18
(9 years ago)
by gpertea:
added a few more source files, test code
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gstopwatch.h
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18
(9 years ago)
by gpertea:
added a few more source files, test code
|
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gtest.cpp
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144
(9 years ago)
by gpertea:
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
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proc_mem.cpp
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18
(9 years ago)
by gpertea:
added a few more source files, test code
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proc_mem.h
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18
(9 years ago)
by gpertea:
added a few more source files, test code
|
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yarn.c
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107
(9 years ago)
by gpertea:
wip GYarn (threads)
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yarn.h
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107
(9 years ago)
by gpertea:
wip GYarn (threads)
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