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root/gclib/gclib
r287
File Last Change
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AceParser.cpp 16 (6 years ago) by gpertea: sync with local source
AceParser.h 16 (6 years ago) by gpertea: sync with local source
GAlnExtend.cpp 193 (6 years ago) by gpertea:
GAlnExtend.h 194 (6 years ago) by gpertea: increased "safe length" for an alignment from 16 to 22
GArgs.cpp 16 (6 years ago) by gpertea: sync with local source
GArgs.h 16 (6 years ago) by gpertea: sync with local source
GBam.cpp 235 (6 years ago) by gpertea: some clarifications in CIGAR operation parsing
GBam.h 234 (6 years ago) by gpertea: fixed find_tag() to use the bam_aux_get()
GBase.cpp 258 (5 years ago) by gpertea: commented out saprintf(), not used
GBase.h 258 (5 years ago) by gpertea: commented out saprintf(), not used
GBitVec.h 286 (5 years ago) by gpertea: slight mods for rejoin use
GCdbYank.cpp 16 (6 years ago) by gpertea: sync with local source
GCdbYank.h 264 (5 years ago) by gpertea: minor refactoring etc
GFaSeqGet.cpp 171 (6 years ago) by gpertea: wip fqtrim
GFaSeqGet.h 153 (6 years ago) by gpertea: still working on trans-splicing/fusions in gff
GFastaFile.h 16 (6 years ago) by gpertea: sync with local source
GFastaIndex.cpp 255 (6 years ago) by gpertea: minor reformatting by Cole
GFastaIndex.h 18 (6 years ago) by gpertea: added a few more source files, test code
GHash.hh 286 (5 years ago) by gpertea: slight mods for rejoin use
GIntervalTree.cpp 171 (6 years ago) by gpertea: wip fqtrim
GIntervalTree.h 264 (5 years ago) by gpertea: minor refactoring etc
GIntervalTree.hh 264 (5 years ago) by gpertea: minor refactoring etc
GList.hh 264 (5 years ago) by gpertea: minor refactoring etc
GStack.hh 264 (5 years ago) by gpertea: minor refactoring etc
GStr.cpp 174 (6 years ago) by gpertea: wip fqtrim
GStr.h 174 (6 years ago) by gpertea: wip fqtrim
GThreads.cpp 156 (6 years ago) by gpertea: adding refactored TinyThread++ code
GThreads.h 156 (6 years ago) by gpertea: adding refactored TinyThread++ code
GVec.hh 287 (5 years ago) by gpertea:
GYarn.cpp 107 (6 years ago) by gpertea: wip GYarn (threads)
GYarn.h 107 (6 years ago) by gpertea: wip GYarn (threads)
LayoutParser.cpp 16 (6 years ago) by gpertea: sync with local source
LayoutParser.h 268 (5 years ago) by gpertea:
Makefile 156 (6 years ago) by gpertea: adding refactored TinyThread++ code
bmsearch.cpp 99 (6 years ago) by gpertea: wip
bmsearch.h 99 (6 years ago) by gpertea: wip
codons.cpp 2 (8 years ago) by gpertea: added my gclib source files
codons.h 2 (8 years ago) by gpertea: added my gclib source files
gcdb.cpp 264 (5 years ago) by gpertea: minor refactoring etc
gcdb.h 264 (5 years ago) by gpertea: minor refactoring etc
gdimg.cpp 264 (5 years ago) by gpertea: minor refactoring etc
gdimg.h 264 (5 years ago) by gpertea: minor refactoring etc
gdna.cpp 173 (6 years ago) by gpertea: wip fqtrim
gdna.h 171 (6 years ago) by gpertea: wip fqtrim
gff.cpp 286 (5 years ago) by gpertea: slight mods for rejoin use
gff.h 286 (5 years ago) by gpertea: slight mods for rejoin use
gstopwatch.cpp 18 (6 years ago) by gpertea: added a few more source files, test code
gstopwatch.h 18 (6 years ago) by gpertea: added a few more source files, test code
gtest.cpp 144 (6 years ago) by gpertea: added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
proc_mem.cpp 264 (5 years ago) by gpertea: minor refactoring etc
proc_mem.h 18 (6 years ago) by gpertea: added a few more source files, test code
threads.cpp 198 (6 years ago) by gpertea:
yarn.c 107 (6 years ago) by gpertea: wip GYarn (threads)
yarn.h 107 (6 years ago) by gpertea: wip GYarn (threads)
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