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root/gclib/gclib/GAlnExtend.cpp
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# Line 463 | Line 463
463          if (edit_block == NULL) {
464             // if no traceback is specified, the next row of
465             //   last_seq2_off can reuse previously allocated memory
466 <           //TODO FIXME The following assumes two arrays of
466 >           //WARNING The following assumes two arrays of
467             //  at least max_dist+4 int's have already been allocated
468              last_seq2_off[d + 1] = last_seq2_off[d - 1];
469              }
# Line 472 | Line 472
472              // so a new row must be allocated
473              last_seq2_off[d + 1] = (int*)mem_pool->getByteSpace((diag_upper - diag_lower + 7)*sizeof(int));
474              // move the origin for this row backwards
475 <            //TODO FIXME: dubious pointer arithmetic ?!
475 >            // dubious pointer arithmetic ?!
476              //last_seq2_off[d + 1] = last_seq2_off[d + 1] - diag_lower + 2;
477              }
478      }   // end loop over distinct distances

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