| 7 |
|
#include "GList.hh" |
| 8 |
|
#include "gdna.h" |
| 9 |
|
|
| 10 |
< |
//#define GDEBUG 1 |
| 10 |
> |
//#define TRIMDEBUG 1 |
| 11 |
|
|
| 12 |
|
enum { |
| 13 |
|
gxEDIT_OP_MASK = 0x3, |
| 21 |
|
#define GX_EDITOP_GET(op) ((op) & gxEDIT_OP_MASK) |
| 22 |
|
#define GX_EDITOP_CONS(op, val) (((val) << 2) | ((op) & gxEDIT_OP_MASK)) |
| 23 |
|
|
| 24 |
< |
#ifdef GDEBUG |
| 24 |
> |
#ifdef TRIMDEBUG |
| 25 |
|
enum {c_black=0, |
| 26 |
|
c_red, c_green,c_brown,c_blue,c_magenta,c_cyan,c_white |
| 27 |
|
}; |
| 378 |
|
} |
| 379 |
|
} |
| 380 |
|
|
| 381 |
< |
#ifdef GDEBUG |
| 381 |
> |
#ifdef TRIMDEBUG |
| 382 |
|
void printAlignment(FILE* f, const char* sa, int sa_len, |
| 383 |
|
const char* sb, int sb_len) { |
| 384 |
|
//print seq A |
