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increased "safe length" for an alignment from 16 to 22
adjust safelen threshold from 12 to 16
works
fqtrim works
fqtrim
fqtrim reworked
wip fqtrim
wip fqtrim
wip fqtrim
added GBitVec.h; removed operator> requirement for sorted vectors; swap() is now template Gswap()
added GStr::reverse(), GAlnExtend stringency tweaks
fixed GVec, GArray to use new[] instead of malloc
adjusting params
wip
moved match_LeftEnd() and match_RightEnd() to GAlnExtend
added gapped alignment extension code
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