ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/gclib/gffread/Makefile
Revision: 17
Committed: Mon Jul 18 20:57:05 2011 UTC (8 years, 3 months ago) by gpertea
File size: 1909 byte(s)
Log Message:
sync with local source

Line File contents
1 GCLDIR := ../gclib
2 SEARCHDIRS := -I. -I${GCLDIR}
3
4 SYSTYPE := $(shell uname)
5
6 MACHTYPE := $(shell uname -m)
7 ifeq ($(MACHTYPE), i686)
8 MARCH = -march=i686
9 else
10 MARCH =
11 endif
12
13 CC := g++
14
15 BASEFLAGS := -Wall -Wextra ${SEARCHDIRS} $(MARCH) -D_FILE_OFFSET_BITS=64 \
16 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-exceptions -fno-rtti
17
18 #add the link-time optimization flag if gcc version > 4.5
19 GCC_VERSION:=$(subst ., ,$(shell gcc -dumpversion))
20 GCC_MAJOR:=$(word 1,$(GCC_VERSION))
21 GCC_MINOR:=$(word 2,$(GCC_VERSION))
22 #GCC_SUB:=$(word 3,$(GCC_VERSION))
23 GCC_SUB:=x
24
25 GCC45OPTS :=
26 GCC45OPTMAIN :=
27
28 ifeq ($(findstring debug,$(MAKECMDGOALS)),)
29 CFLAGS := -O2 -DNDEBUG $(BASEFLAGS)
30 LDFLAGS :=
31 ifeq ($(shell expr $(GCC_MAJOR).$(GCC_MINOR) '>=' 4.5),1)
32 CFLAGS += -flto
33 GCC45OPTS := -flto
34 GCC45OPTMAIN := -fwhole-program
35 endif
36 else
37 CFLAGS := -g -DDEBUG $(BASEFLAGS)
38 LDFLAGS := -g
39 endif
40
41 %.o : %.cpp
42 ${CC} ${CFLAGS} -c $< -o $@
43
44 # C/C++ linker
45
46 LINKER := g++
47 LIBS :=
48 OBJS := ${GCLDIR}/GBase.o ${GCLDIR}/GArgs.o ${GCLDIR}/GFaSeqGet.o \
49 ${GCLDIR}/gdna.o ${GCLDIR}/codons.o ${GCLDIR}/gff.o ${GCLDIR}/GStr.o \
50 ${GCLDIR}/GFastaIndex.o gff_utils.o
51 # ${GCLDIR}/gcdb.o ${GCLDIR}/GCdbYank.o
52
53 .PHONY : all
54 all: gffread
55
56 version: ; @echo "GCC Version is: "$(GCC_MAJOR)":"$(GCC_MINOR)":"$(GCC_SUB)
57 @echo "> GCC Opt. string is: "$(GCC45OPTS)
58 debug: gffread
59 $(OBJS) : $(GCLDIR)/GBase.h $(GCLDIR)/gff.h
60 gffread.o : gff_utils.h $(GCLDIR)/GBase.h $(GCLDIR)/gff.h
61 gff_utils.o : gff_utils.h $(GCLDIR)/gff.h
62 ${GCLDIR}/gff.o : ${GCLDIR}/gff.h ${GCLDIR}/GFaSeqGet.h ${GCLDIR}/GList.hh ${GCLDIR}/GHash.hh
63 ${GCLDIR}/GFaSeqGet.o : ${GCLDIR}/GFaSeqGet.h
64 gffread: $(OBJS) gffread.o
65 ${LINKER} ${LDFLAGS} $(GCC45OPTS) $(GCC45OPTMAIN) -o $@ ${filter-out %.a %.so, $^} ${LIBS}
66
67 # target for removing all object files
68
69 .PHONY : clean
70 clean::
71 @${RM} gffread gffread.o* gffread.exe $(OBJS)
72 @${RM} core.*