gclib/scripts/twinscan_multi.csh

#/bin/tcsh -f
set plat=`uname -p`
set tsdir='fs/sz-user-supported/Linux-'$plat
if (-d "/sz$tsdir") then
 set tsdir="/sz$tsdir/twinscan"
else
 set tsdir="/$tsdir/twinscan"
endif

set hmm=$tsdir/parameters/human_iscan-9993-genes-09-13-2004.zhmm
foreach inf ( *.isoFa.* )
$tsdir/bin/iscan $hmm $inf > $inf.twsgtf
end
Revision:	23
Committed:	Tue Jul 26 21:44:38 2011 UTC (9 years, 5 months ago) by gpertea
Original Path:	*ann_bin/twinscan_multi.csh*
File size:	314 byte(s)
Log Message:	adding misc scripts
Line	File contents
1	#/bin/tcsh -f
2	set plat=`uname -p`
3	set tsdir='fs/sz-user-supported/Linux-'$plat
4	if (-d "/sz$tsdir") then
5	set tsdir="/sz$tsdir/twinscan"
6	else
7	set tsdir="/$tsdir/twinscan"
8	endif
9
10	set hmm=$tsdir/parameters/human_iscan-9993-genes-09-13-2004.zhmm
11	foreach inf ( .isoFa. )
12	$tsdir/bin/iscan $hmm $inf > $inf.twsgtf
13	end