Revision 89 - (view) (annotate) - [select for diffs]
Modified Mon Oct 3 18:42:24 2011 UTC (9 years, 6 months ago) by gpertea
File length: 1710 byte(s)
Diff to previous 87

separate wrappers for 5' and  3' alignments

Revision 87 - (view) (annotate) - [select for diffs]
Modified Sun Oct 2 19:12:03 2011 UTC (9 years, 6 months ago) by gpertea
File length: 1127 byte(s)
Diff to previous 86

disable pointer arithmetic in GXGreedyExtend(), it's bad

Revision 86 - (view) (annotate) - [select for diffs]
Modified Fri Sep 30 21:38:39 2011 UTC (9 years, 6 months ago) by gpertea
File length: 1022 byte(s)
Diff to previous 84

fixed a few more subtle bugs

Revision 84 - (view) (annotate) - [select for diffs]
Modified Fri Sep 30 03:19:32 2011 UTC (9 years, 6 months ago) by gpertea
File length: 506 byte(s)
Diff to previous 81

wip bad

Revision 81 - (view) (annotate) - [select for diffs]
Modified Thu Sep 29 19:02:24 2011 UTC (9 years, 6 months ago) by gpertea
File length: 424 byte(s)
Diff to previous 78

fixes, still a bug with flast_d[d] = flast_d[d] - flower + 2;

Revision 78 - (view) (annotate) - [select for diffs]
Modified Wed Sep 28 03:20:10 2011 UTC (9 years, 6 months ago) by gpertea
File length: 316 byte(s)
Diff to previous 75

3' match seems to work, needs a few refinements

Revision 75 - (view) (annotate) - [select for diffs]
Modified Tue Sep 27 02:24:57 2011 UTC (9 years, 6 months ago) by gpertea
File length: 423 byte(s)
Diff to previous 74

implementing GreedyAlign for best rseeds etc.

Revision 74 - (view) (annotate) - [select for diffs]
Added Tue Sep 27 01:22:37 2011 UTC (9 years, 6 months ago) by gpertea
File length: 205 byte(s)

added seqalign files