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root/gclib/tophat_cpp/common.cpp
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# Line 557 | Line 557
557    }
558  
559   void FZPipe::rewind() {
560 +  if (is_bam) return; //does nothing for BAM mappings
561    if (pipecmd.empty()) {
562        if (file!=NULL) {
563             ::rewind(file);

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