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root/gclib/tophat_cpp/wiggles.h
Revision: 29
Committed: Tue Aug 2 21:24:54 2011 UTC (8 years, 9 months ago) by gpertea
File size: 390 byte(s)
Log Message:
adding tophat source work

Line User Rev File contents
1 gpertea 29 #ifndef WIGGLES_H
2     #define WIGGLES_H
3    
4     /*
5     * wiggles.h
6     * TopHat
7     *
8     * Created by Cole Trapnell on 12/12/08.
9     * Copyright 2008 Cole Trapnell. All rights reserved.
10     *
11     */
12    
13     #include "common.h"
14     #include "bwt_map.h"
15    
16     void print_wiggle_header(FILE* coverage_out);
17     void print_wiggle_for_ref(FILE* coverage_out,
18     const string& ref_name,
19     const vector<unsigned int>& DoC);
20    
21    
22     #endif