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root/gclib/tophat_cpp/wiggles.h
Revision: 29
Committed: Tue Aug 2 21:24:54 2011 UTC (8 years, 2 months ago) by gpertea
File size: 390 byte(s)
Log Message:
adding tophat source work

Line File contents
1 #ifndef WIGGLES_H
2 #define WIGGLES_H
3
4 /*
5 * wiggles.h
6 * TopHat
7 *
8 * Created by Cole Trapnell on 12/12/08.
9 * Copyright 2008 Cole Trapnell. All rights reserved.
10 *
11 */
12
13 #include "common.h"
14 #include "bwt_map.h"
15
16 void print_wiggle_header(FILE* coverage_out);
17 void print_wiggle_for_ref(FILE* coverage_out,
18 const string& ref_name,
19 const vector<unsigned int>& DoC);
20
21
22 #endif