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exampledata/ 40 (8 years ago) by clausted: Move two html documentation files into /help subdirectory.
help/ 40 (8 years ago) by clausted: Move two html documentation files into /help subdirectory.
models2010/ 41 (8 years ago) by clausted: Moved old data class "SPRdataclass" and accompanying surface interaction model modules to /models2010 subdirectory. The plan is to implement these models for use with the "ba_class" and the modules in the parent directory. Should all the models be added to mdl_module or should they each go in their own module? I am undecided.
sphinx/ 46 (8 years ago) by clausted: Update the sphinx documentation. Add a new file called mainapi.rst to join tutorial01.rst and index.rst.
Copying.txt 1 (9 years ago) by clausted: Initial import of Osprai project
License.txt 1 (9 years ago) by clausted: Initial import of Osprai project
ba_class.py 28 (9 years ago) by clausted: Changes to params dictionary. Valid values for 'fixed' are 'fixed' 'float' or an integer. True and False are no longer acceptable. Now mutli-ROI curve fitting seems to work!
cal_module.py 36 (8 years ago) by clausted: Add zerotime() and zerovalue() to cal_module for zeroing the initial values of sensorgrams.
fit_module.py 28 (9 years ago) by clausted: Changes to params dictionary. Valid values for 'fixed' are 'fixed' 'float' or an integer. True and False are no longer acceptable. Now mutli-ROI curve fitting seems to work!
io_module.py 14 (9 years ago) by clausted: Added features to select time points for measuring binding responses and to output that data to a file or scatterplot. Added the background subtraction feature to cal_module. Also a few bug fixes. --CGL
mdl_module.py 29 (9 years ago) by clausted: Add a parameter ('cofa') to the 1to1 models that represents a concentration factor. This allows for easier analysis of a dilution series. For example, if two ROIs contain data for the same sample but at a dilutions of 1:2 and 1:4, the set 'conc' value to the molar stock concentration and set the two 'cofa' values to 0.5 and 0.25.
osprai_one.py 36 (8 years ago) by clausted: Add zerotime() and zerovalue() to cal_module for zeroing the initial values of sensorgrams.
test.py 29 (9 years ago) by clausted: Add a parameter ('cofa') to the 1to1 models that represents a concentration factor. This allows for easier analysis of a dilution series. For example, if two ROIs contain data for the same sample but at a dilutions of 1:2 and 1:4, the set 'conc' value to the molar stock concentration and set the two 'cofa' values to 0.5 and 0.25.
vu_module.py 44 (8 years ago) by clausted: First, all public functions now have a standard format for their docstrings. They use reStructuredText and symbols recognized by Sphinx automatic documentation. More comments describing internal design is placed at the end of the function. Second, functions that do not need to be public have been made private by prefixing double-underscore to their names. This will help prevent name collisions in the future and it also serves to exclude them from the Sphinx autodocumentation.
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