1 |
clausted |
21 |
""" |
2 |
|
|
osprai_one: Module to tie together the various osprai tools. |
3 |
|
|
Christopher Lausted, Institute for Systems Biology, |
4 |
|
|
Yuhang Wan, OSPRAI developers |
5 |
clausted |
27 |
Last modified on 100517 (yymmdd) |
6 |
clausted |
21 |
|
7 |
|
|
Examples: |
8 |
|
|
from osprai_one import * |
9 |
|
|
""" |
10 |
clausted |
27 |
__version__ = "100517" |
11 |
|
|
__all__ = ['BiosensorArray', 'RegOfInterest', |
12 |
|
|
'readsprit', 'readclamp', 'readicmtxt', 'readbiosensor', |
13 |
|
|
'applygal', 'applykey', 'applymethod', 'writesprit', |
14 |
|
|
'writeclamp', 'writebiosensor', |
15 |
|
|
'dotgraph', 'linegraph', 'dualgraph', 'scatterplot', |
16 |
clausted |
36 |
'calibrate', 'bgset', 'bgsubt', 'copyinterval', 'zerotime', 'zerovalue', |
17 |
clausted |
27 |
'mclma', 'clma', 'lma', |
18 |
|
|
'drift', 'simple1to1', 'simple1to1_mtl', |
19 |
|
|
'deepcopy', 'exit', 'getcwd', 'date', |
20 |
|
|
'arange', 'zeros',] |
21 |
clausted |
21 |
|
22 |
|
|
|
23 |
|
|
## Import from OSPRAI project libraries |
24 |
|
|
|
25 |
|
|
from ba_class import BiosensorArray |
26 |
clausted |
27 |
from ba_class import RegOfInterest |
27 |
clausted |
21 |
|
28 |
|
|
from io_module import readsprit |
29 |
|
|
from io_module import readclamp |
30 |
|
|
from io_module import readicmtxt |
31 |
|
|
from io_module import readbiosensor |
32 |
|
|
from io_module import applygal |
33 |
|
|
from io_module import applykey |
34 |
|
|
from io_module import applymethod |
35 |
|
|
from io_module import writesprit |
36 |
|
|
from io_module import writeclamp |
37 |
clausted |
27 |
from io_module import writebiosensor |
38 |
clausted |
21 |
|
39 |
|
|
from vu_module import dotgraph |
40 |
|
|
from vu_module import linegraph |
41 |
|
|
from vu_module import dualgraph |
42 |
|
|
from vu_module import scatterplot |
43 |
|
|
|
44 |
|
|
from cal_module import calibrate |
45 |
|
|
from cal_module import bgset |
46 |
|
|
from cal_module import bgsubt |
47 |
clausted |
24 |
from cal_module import copyinterval |
48 |
clausted |
36 |
from cal_module import zerotime |
49 |
|
|
from cal_module import zerovalue |
50 |
clausted |
21 |
|
51 |
clausted |
27 |
from fit_module import mclma |
52 |
clausted |
21 |
from fit_module import clma |
53 |
|
|
from fit_module import lma |
54 |
|
|
|
55 |
|
|
from mdl_module import drift |
56 |
|
|
from mdl_module import simple1to1 |
57 |
clausted |
26 |
from mdl_module import simple1to1_mtl |
58 |
clausted |
21 |
|
59 |
|
|
|
60 |
|
|
## Import from standard libraries. |
61 |
|
|
|
62 |
|
|
from copy import deepcopy |
63 |
|
|
from sys import exit |
64 |
|
|
from os import getcwd |
65 |
|
|
from datetime import date |
66 |
|
|
from numpy import arange |
67 |
|
|
from numpy import zeros |
68 |
|
|
|
69 |
|
|
################################# End of module ################################# |