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root/osprai/osprai/trunk/osprai_one.py
Revision: 36
Committed: Sat Nov 20 01:12:26 2010 UTC (8 years, 10 months ago) by clausted
File size: 2011 byte(s)
Log Message:
Add zerotime() and zerovalue() to cal_module for zeroing the initial values of sensorgrams.
Line User Rev File contents
1 clausted 21 """
2     osprai_one: Module to tie together the various osprai tools.
3     Christopher Lausted, Institute for Systems Biology,
4     Yuhang Wan, OSPRAI developers
5 clausted 27 Last modified on 100517 (yymmdd)
6 clausted 21
7     Examples:
8     from osprai_one import *
9     """
10 clausted 27 __version__ = "100517"
11     __all__ = ['BiosensorArray', 'RegOfInterest',
12     'readsprit', 'readclamp', 'readicmtxt', 'readbiosensor',
13     'applygal', 'applykey', 'applymethod', 'writesprit',
14     'writeclamp', 'writebiosensor',
15     'dotgraph', 'linegraph', 'dualgraph', 'scatterplot',
16 clausted 36 'calibrate', 'bgset', 'bgsubt', 'copyinterval', 'zerotime', 'zerovalue',
17 clausted 27 'mclma', 'clma', 'lma',
18     'drift', 'simple1to1', 'simple1to1_mtl',
19     'deepcopy', 'exit', 'getcwd', 'date',
20     'arange', 'zeros',]
21 clausted 21
22    
23     ## Import from OSPRAI project libraries
24    
25     from ba_class import BiosensorArray
26 clausted 27 from ba_class import RegOfInterest
27 clausted 21
28     from io_module import readsprit
29     from io_module import readclamp
30     from io_module import readicmtxt
31     from io_module import readbiosensor
32     from io_module import applygal
33     from io_module import applykey
34     from io_module import applymethod
35     from io_module import writesprit
36     from io_module import writeclamp
37 clausted 27 from io_module import writebiosensor
38 clausted 21
39     from vu_module import dotgraph
40     from vu_module import linegraph
41     from vu_module import dualgraph
42     from vu_module import scatterplot
43    
44     from cal_module import calibrate
45     from cal_module import bgset
46     from cal_module import bgsubt
47 clausted 24 from cal_module import copyinterval
48 clausted 36 from cal_module import zerotime
49     from cal_module import zerovalue
50 clausted 21
51 clausted 27 from fit_module import mclma
52 clausted 21 from fit_module import clma
53     from fit_module import lma
54    
55     from mdl_module import drift
56     from mdl_module import simple1to1
57 clausted 26 from mdl_module import simple1to1_mtl
58 clausted 21
59    
60     ## Import from standard libraries.
61    
62     from copy import deepcopy
63     from sys import exit
64     from os import getcwd
65     from datetime import date
66     from numpy import arange
67     from numpy import zeros
68    
69     ################################# End of module #################################