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root/osprai/osprai/trunk/osprai_one.py
Revision: 36
Committed: Sat Nov 20 01:12:26 2010 UTC (8 years, 10 months ago) by clausted
File size: 2011 byte(s)
Log Message:
Add zerotime() and zerovalue() to cal_module for zeroing the initial values of sensorgrams.
Line File contents
1 """
2 osprai_one: Module to tie together the various osprai tools.
3 Christopher Lausted, Institute for Systems Biology,
4 Yuhang Wan, OSPRAI developers
5 Last modified on 100517 (yymmdd)
6
7 Examples:
8 from osprai_one import *
9 """
10 __version__ = "100517"
11 __all__ = ['BiosensorArray', 'RegOfInterest',
12 'readsprit', 'readclamp', 'readicmtxt', 'readbiosensor',
13 'applygal', 'applykey', 'applymethod', 'writesprit',
14 'writeclamp', 'writebiosensor',
15 'dotgraph', 'linegraph', 'dualgraph', 'scatterplot',
16 'calibrate', 'bgset', 'bgsubt', 'copyinterval', 'zerotime', 'zerovalue',
17 'mclma', 'clma', 'lma',
18 'drift', 'simple1to1', 'simple1to1_mtl',
19 'deepcopy', 'exit', 'getcwd', 'date',
20 'arange', 'zeros',]
21
22
23 ## Import from OSPRAI project libraries
24
25 from ba_class import BiosensorArray
26 from ba_class import RegOfInterest
27
28 from io_module import readsprit
29 from io_module import readclamp
30 from io_module import readicmtxt
31 from io_module import readbiosensor
32 from io_module import applygal
33 from io_module import applykey
34 from io_module import applymethod
35 from io_module import writesprit
36 from io_module import writeclamp
37 from io_module import writebiosensor
38
39 from vu_module import dotgraph
40 from vu_module import linegraph
41 from vu_module import dualgraph
42 from vu_module import scatterplot
43
44 from cal_module import calibrate
45 from cal_module import bgset
46 from cal_module import bgsubt
47 from cal_module import copyinterval
48 from cal_module import zerotime
49 from cal_module import zerovalue
50
51 from fit_module import mclma
52 from fit_module import clma
53 from fit_module import lma
54
55 from mdl_module import drift
56 from mdl_module import simple1to1
57 from mdl_module import simple1to1_mtl
58
59
60 ## Import from standard libraries.
61
62 from copy import deepcopy
63 from sys import exit
64 from os import getcwd
65 from datetime import date
66 from numpy import arange
67 from numpy import zeros
68
69 ################################# End of module #################################