osprai/trunk/test.py

"""
Christopher Lausted, Institute for Systems Biology
Last modified on 100408 (yymmdd)
Small script to test ba_class, io_module, etc.
"""

import io_module as io
reload(io)  ## In case io_module code has changed.

ba1 = io.readbiosensor("example-biosensor.txt")
#ba1 = io.readicmtxt("example-icm.txt")
#ba1 = io.readsprit("example-sprit.txt")
#ba1 = io.applykey(ba1, "example-key.tsv")
ba1.set_plot_all()
ba1.plot()

#io.writesprit(ba1,"testwritesprit.txt")
#io.writeclamp(ba1,"testwriteclamp.txt")
io.writebiosensor(ba1, "testwritebiosensor.txt")

print "Done with test."
Revision:	9
Committed:	Sat Apr 10 00:21:02 2010 UTC (10 years, 9 months ago) by clausted
File size:	595 byte(s)
Log Message:	Add readbiosensor() and writebiosensor() capabilities to io_module.
Line	User	Rev	File contents
1	clausted	7	"""
2			Christopher Lausted, Institute for Systems Biology
3			Last modified on 100408 (yymmdd)
4			Small script to test ba_class, io_module, etc.
5			"""
6
7			import io_module as io
8	clausted	9	reload(io) ## In case io_module code has changed.
9	clausted	7
10	clausted	9	ba1 = io.readbiosensor("example-biosensor.txt")
11			#ba1 = io.readicmtxt("example-icm.txt")
12			#ba1 = io.readsprit("example-sprit.txt")
13			#ba1 = io.applykey(ba1, "example-key.tsv")
14			ba1.set_plot_all()
15			ba1.plot()
16	clausted	7
17			#io.writesprit(ba1,"testwritesprit.txt")
18			#io.writeclamp(ba1,"testwriteclamp.txt")
19	clausted	9	io.writebiosensor(ba1, "testwritebiosensor.txt")
20	clausted	7
21			print "Done with test."