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root/osprai/osprai/trunk/test.py
Revision: 12
Committed: Tue Apr 13 01:33:13 2010 UTC (9 years, 1 month ago) by clausted
File size: 865 byte(s)
Log Message:
Addition of cal_module to provide a calibration tool and related features.  Added the time2val function to the ba class.  It has a bug now, but it will be useful for the calibration tool.
Line File contents
1 """
2 Christopher Lausted, Institute for Systems Biology
3 Last modified on 100408 (yymmdd)
4 Small script to test ba_class, io_module, etc.
5 """
6
7 ## Import modules.
8 import vu_module as vu
9 import io_module as io
10 import cal_module as cal
11 ## Reload in case code has changed.
12 reload (vu)
13 reload(io)
14 reload(cal)
15
16 #ba1 = io.readbiosensor("example-biosensor.txt")
17 ba1 = io.readicmtxt("example-icm.txt")
18 #ba1 = io.readsprit("example-sprit.txt")
19 #ba1 = io.applykey(ba1, "example-key.tsv")
20 #ba1.set_plot_all()
21 #ba1.set_plot_list(range(6))
22 #ba1.plot()
23
24 #io.writesprit(ba1,"testwritesprit.txt")
25 #io.writeclamp(ba1,"testwriteclamp.txt")
26 #io.writebiosensor(ba1, "testwritebiosensor.txt")
27
28 vu.linegraph(ba1)
29 #vu.dotgraph(ba1)
30 #vu.dualgraph(ba1, ba1)
31
32 ba2 = cal.calibrate(ba1, ba1, 1950, 2025)
33 vu.linegraph(ba2)
34
35 input("Done with test. Press any key")