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Revision 70 - (view) (annotate) - [select for diffs]
Modified Wed Aug 15 19:47:15 2012 UTC (7 years, 2 months ago) by clausted
File length: 11094 byte(s)
Diff to previous 67
Make automatic code testing of every module available by running `python osprai_one.py`
Revision 67 - (view) (annotate) - [select for diffs]
Modified Thu Apr 26 00:15:50 2012 UTC (7 years, 6 months ago) by clausted
File length: 10786 byte(s)
Diff to previous 65
Fix bug in numbering ROIs in io_module.readicmtext().
Enhance vu_module.dualgraph() to automatically show modeled data along with read data.
Increase running average length in mdl_module; this isn't a good solution.
Change private function names from double-undescore to single-underscore prefixes.
Revision 65 - (view) (annotate) - [select for diffs]
Modified Fri May 20 16:33:02 2011 UTC (8 years, 5 months ago) by clausted
File length: 10070 byte(s)
Diff to previous 54
Added much testing to all modules using docstrings and doctest.  To help this, I also added two optional parameters to mclma(), verbose and maxiter.  For example, use "mclma(rois, verbose=False, maxiter=99)" to run the regression up to 99 iterations without echoing progress to the standard output.

Revision 54 - (view) (annotate) - [select for diffs]
Modified Wed Feb 16 21:29:02 2011 UTC (8 years, 8 months ago) by clausted
File length: 10069 byte(s)
Diff to previous 47
Added fit_module and mdl_module to sphinx documentation.
Revision 47 - (view) (annotate) - [select for diffs]
Modified Fri Feb 4 19:06:37 2011 UTC (8 years, 9 months ago) by clausted
File length: 10019 byte(s)
Diff to previous 44
Changes only to the docstrings of four modules so that Sphinx can use them.  Update references in mainapi.rst.  
Revision 44 - (view) (annotate) - [select for diffs]
Modified Wed Feb 2 22:17:09 2011 UTC (8 years, 9 months ago) by clausted
File length: 10019 byte(s)
Diff to previous 16
First, all public functions now have a standard format for their docstrings.  They use reStructuredText and symbols recognized by Sphinx automatic documentation. More comments describing internal design is placed at the end of the function.
Second, functions that do not need to be public have been made private by prefixing double-underscore to their names.  This will help prevent name collisions in the future and it also serves to exclude them from the Sphinx autodocumentation.
Revision 16 - (view) (annotate) - [select for diffs]
Modified Sun Apr 18 05:34:10 2010 UTC (9 years, 6 months ago) by clausted
File length: 7919 byte(s)
Diff to previous 14
Fix bug in "Next" button script.
Revision 14 - (view) (annotate) - [select for diffs]
Modified Wed Apr 14 00:40:11 2010 UTC (9 years, 7 months ago) by clausted
File length: 7803 byte(s)
Diff to previous 11
Added features to select time points for measuring binding responses and to output that data to a file or scatterplot.  Added the background subtraction feature to cal_module.  Also a few bug fixes. --CGL
Revision 11 - (view) (annotate) - [select for diffs]
Added Mon Apr 12 22:59:57 2010 UTC (9 years, 7 months ago) by clausted
File length: 5454 byte(s)
Introduce vu_module.py for viewing ba objects.  This GUI uses Tk and has buttons to allow users to move through the sensorgrams six-at-a-time.  The traces can be dotted or continuous lines or both.  Specify two ba objects and the first will be dotted while the second will be continuous.  This could be useful for comparing real and simulated data. --CGL 

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