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r1070
File Last Change
branches/ 924 (10 years ago) by winkelma: merged trunk into branch
tags/ 1003 (10 years ago) by hstehr: tagging OWL 1.2.0 in sync with CMView 1.2.0 before major refactoring
trunk/ 1070 (10 years ago) by jmduarteg: Fixed bug in TcoffeeRunner. The t_coffee process was hanging after spawning. This didn't happen before, it can be related to the version of t_coffee (I'm using 8.14). Basically t_coffee seems to be doing something weird with stderr and stdout, java doesn't like it and makes the process hang (as usual java has a lot of problems in this area, see StreamGobbler class). The way to solve it is use the -quiet switch of t_coffee that can be used to redirect output to a file or have a complete quiet terminal.
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