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r1625
File Last Change (rev)
trunk/ 1625 (6 years ago) by jmduarteg: Fixed issue: now setting unknown atom type whenever we can't guess the element. If we read from PDB file and there is an unguesseable atom that we then have to write out again the code would fail because in writeAtoms we assume we have atom types for everything.
tags/ 1600 (6 years ago) by jmduarteg: Tagging for eppic release 1.9.6. - totally redone interface calculation: huge improvements in runtime and memory usage, explores also 2nd neighbours, uses symmetry-redundancy elimination, bugs fixed - introduced minimum ASA threshold for considering residue at surface - cofactors can now be used for ASA calculation in interfaces - blast runner now chooses matrix to use based on sequence length as it is standard use in blast servers - introduced blast+ support - introduced clustalo support in HomologsList - improvements and important fixes in HomologsList alignments
branches/ 1438 (8 years ago) by jmduarteg: An ant script for owl!
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