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r747
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trunk/ 747 (11 years ago) by duarte: Initial commit of StructAligner interface and implementation PaulStructAligner. New reader in Alignment: now we can read CLUSTAL alignment files, not extensively tested. Also Alignment now only throws generic FileFormatErrors instead of specific file format errors.
tags/ 732 (11 years ago) by duarte: Tagging ver 0.9.6 for CMView 0.9.6. Now using jung beta1 jars.
branches/ 734 (11 years ago) by stehr: Added a serialVersionUID and got rid of an obsolete import to avoid compiler warnings
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