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root/owl/tags/aglappe-0.8.6/runGenDbGraph.sh
Revision: 440
Committed: Wed Nov 28 16:42:41 2007 UTC (11 years, 10 months ago) by duarte
File size: 353 byte(s)
Log Message:
Tagging ver. 0.8.6. This will be the last pre-JUNG tag
Line File contents
1 #!/bin/sh
2
3 if [ -z "$4" ]
4 then
5 echo "usage: $0 <listfile> <cutoff> <ct> <outdb>"
6 echo "where listfile contains two columns, pdb code and chain code"
7 exit 1
8 fi
9
10 listfile=$1
11 cutoff=$2
12 ct=$3
13 outdb=$4
14
15
16 exec 0<$listfile
17
18 while read pdbCode pdbChainCode
19 do
20 java -Xmx1024m genDbGraph -p $pdbCode -c $pdbChainCode -d $cutoff -t $ct -o $outdb
21 done

Properties

Name Value
svn:executable *