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tools/
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tinker/
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tests/
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sequence/
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sadp/
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proteinstructure/
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ppi/
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litNet/
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graphAveraging/
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features/
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embed/
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deltaRank/
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actionTools/
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writeSASAtoBFactor.java
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writePerAtomDistancesToBFactor.java
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testPymolServer.java
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testPyMol.java
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testPdb.java
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testMySQLConnection.java
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testJUNGframework.java
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testGraph2Pml.java
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testDbRIGraph.java
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testClusterConnection.java
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superimposeMult.java
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scoreDecoys.java
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runMD.java
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reconstruct.java
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pairwiseSeqId.java
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mirrorIt.java
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mapMutations.java
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make-aglappe.sh
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genGraph.java
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genDbGraph.java
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dumpseq.java
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dumppdb.java
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doClassifySingleModels.sh
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createGraphDb.sh
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computeEnergies.java
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compareCMs.java
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compareAlignments.java
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calculateGridDensity.java
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benchmarkGraphAlgorithm.java
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averageGraph.java
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analyseHistone.java
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alignSeq.java
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addSeq2Mcma.java
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Manifest.txt
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