Revision 1693 - Directory Listing
Modified Wed Nov 27 09:02:57 2013 UTC (5 years, 8 months ago) by jmduarteg

Tagging for eppic release 2.0.3
- more PDB metadata parsing: biounit assembly and release date
- improved rmsd calculation: new OptimalSuperposition class introduced
- improvements in interface calculation: now going to 12th cell
- introduced chain clusters and interface clusters
- some more checks in cif file parsing: now won't crash on phenix files

Revision 1633 - Directory Listing
Modified Thu Feb 28 14:39:59 2013 UTC (6 years, 5 months ago) by jmduarteg
Original Path: trunk/scripts

Removing uniprot update script, doesn't belong in owl repo

Revision 1596 - Directory Listing
Modified Mon Nov 5 13:34:38 2012 UTC (6 years, 9 months ago) by jmduarteg
Original Path: trunk/scripts

Now using makeblastdb (for blast+) and also only getting by default uniref100

Revision 1485 - Directory Listing
Modified Tue Nov 15 10:24:40 2011 UTC (7 years, 9 months ago) by jmduarteg
Original Path: trunk/scripts

Adding downloading of uniref100

Revision 1441 - Directory Listing
Modified Thu Aug 18 08:09:04 2011 UTC (8 years ago) by jmduarteg
Original Path: trunk/scripts

Added manifest info to build.xml script. Removed obsolete shell build script

Revision 1289 - Directory Listing
Modified Wed Dec 15 11:57:49 2010 UTC (8 years, 8 months ago) by jmduarteg
Original Path: trunk/scripts

Introduced constant for formatdb executable

Revision 1261 - Directory Listing
Modified Wed Oct 13 08:38:40 2010 UTC (8 years, 10 months ago) by jmduarteg
Original Path: trunk/scripts

Added option to compile specific revision

Revision 1156 - Directory Listing
Modified Wed Jul 7 13:18:24 2010 UTC (9 years, 1 month ago) by jmduarteg
Original Path: trunk/scripts

More fixes to build script

Revision 1152 - Directory Listing
Modified Tue Jul 6 17:44:28 2010 UTC (9 years, 1 month ago) by jmduarteg
Original Path: trunk/scripts

Fixed make script for new structure of owl

Revision 1076 - Directory Listing
Modified Wed May 26 10:10:06 2010 UTC (9 years, 3 months ago) by jmduarteg
Original Path: trunk/scripts

Now using UK mirror

Revision 1053 - Directory Listing
Modified Wed Apr 28 10:58:18 2010 UTC (9 years, 3 months ago) by jmduarteg
Original Path: trunk/scripts

New script to maintain a local copy of blastable uniprot sequences db.

Revision 991 - Directory Listing
Modified Mon Mar 22 14:07:56 2010 UTC (9 years, 5 months ago) by jmduarteg
Original Path: trunk/scripts

Setting the svn:executable property of make-owl.sh so that when it is checked out it will be set to executable.

Revision 978 - Directory Listing
Modified Tue Feb 23 18:57:24 2010 UTC (9 years, 6 months ago) by duarte
Original Path: trunk/scripts

Moved all reconstruct scripts and config files to reconstruct directory. 
Modified scripts accordingly

Revision 976 - Directory Listing
Modified Tue Feb 23 17:36:23 2010 UTC (9 years, 6 months ago) by duarte
Original Path: trunk/scripts

Renamed script and fixed bug

Revision 975 - Directory Listing
Added Tue Feb 23 17:30:54 2010 UTC (9 years, 6 months ago) by duarte
Original Path: trunk/scripts

Moved scripts to scripts directory.
New scripts for packaging the reconstruct executable for distribution.