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root/owl/trunk/proteinstructure
r498
File (rev) Last Change
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contactTypes.dat 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
aapairsBounds.dat 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
SecondaryStructure.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
SecStrucElement.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
ScopRegion.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Scop.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
RIGraph.java 498 (11 years ago) by duarte: Now also copying the CASP RR identifier fields in RIGraph.copy() and in PairwiseAlignmentGraphConverter.converGraph().
RIGNode.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
RIGNbhood.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
RIGEnsemble.java 495 (11 years ago) by stehr: added main function and loading from Multi-model PDB files
RIGEdge.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
RIGCommonNbhood.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
ProtStructGraph.java 497 (11 years ago) by duarte: Extracted some constants: NO_PDB_CODE, NO_PDB_CHAIN_CODE, NO_CONTACT_TYPE, NO_CUTOFF
PredEval.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PirFileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbfilePdb.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbfileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbasePdb.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbaseInconsistencyError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbLoadError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbCodeNotFoundError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PdbChainCodeNotFoundError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Pdb.java 497 (11 years ago) by duarte: Extracted some constants: NO_PDB_CODE, NO_PDB_CHAIN_CODE, NO_CONTACT_TYPE, NO_CUTOFF
PairwiseSequenceAlignment.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
PairwiseAlignmentGraphConverter.java 498 (11 years ago) by duarte: Now also copying the CASP RR identifier fields in RIGraph.copy() and in PairwiseAlignmentGraphConverter.converGraph().
PairwiseAlignmentConverter.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
NbhoodBackgrnd.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
NbhProbDistribution.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
MsdsdPdb.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
MsdsdInconsistentResidueNumbersError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
MaxClusterRunner.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
IntervalSet.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Interval.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
IntPairSet.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
IntPairComparator.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
GraphIdNotFoundError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
GraphIOGDLFile.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
GraphIODb.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
GraphFileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
FileTypeGuesser.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
FileRIGraph.java 497 (11 years ago) by duarte: Extracted some constants: NO_PDB_CODE, NO_PDB_CHAIN_CODE, NO_CONTACT_TYPE, NO_CUTOFF
FileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
FastaFileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
ECRegion.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
EC.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
DbRIGraph.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
ContactType.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
ConformationsNotSameSizeError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
CiffilePdb.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
CiffileFormatError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
CatalyticSite.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
CatalSiteSet.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
CaspRRFileRIGraph.java 497 (11 years ago) by duarte: Extracted some constants: NO_PDB_CODE, NO_PDB_CHAIN_CODE, NO_CONTACT_TYPE, NO_CUTOFF
CaspRRFileData.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Box.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
AlignmentConstructionError.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Alignment.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
AIGraph.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
AIGNode.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
AIGEdge.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
AAinfo.java 492 (11 years ago) by duarte: Copied the aglappe-jung branch into trunk.
(Current path doesn't exist after revision 950)
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