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root/owl/trunk/scripts/make-owl.sh
Revision: 1152
Committed: Tue Jul 6 17:44:28 2010 UTC (9 years, 3 months ago) by jmduarteg
File size: 1084 byte(s)
Log Message:
Fixed make script for new structure of owl
Line User Rev File contents
1 duarte 496 #!/bin/sh
2 duarte 971 if [ -z "$2" ]
3 duarte 496 then
4 duarte 971 echo "Usage: make-owl.sh <svn url> <tempdir>"
5     echo "e.g. for svn url: svn://black/aglappe/trunk or svn://www.bioinformatics.org/svnroot/owl/tags/owl-1.2.0"
6 duarte 496 exit
7     fi
8    
9 duarte 971 svnurl=$1
10 duarte 968 tempdir=$2
11 duarte 496
12 duarte 968 echo "Compiling with:"
13     javac -version
14     echo ""
15 duarte 496
16    
17     cd $tempdir
18    
19 duarte 971 tag=`basename $svnurl`
20 duarte 496
21 duarte 971
22 duarte 496 # exporting from svn
23     echo "Exporting source from svn"
24 duarte 971 svn export $svnurl
25     if [ "$?" -ne "0" ]
26 duarte 496 then
27 duarte 971 echo "Couldn't export from svn. Exiting"
28     exit 1
29 duarte 496 fi
30    
31    
32     # compiling
33     echo "Compiling..."
34 duarte 968 cd $tag/src
35 duarte 971
36    
37     jarfiles=`ls ../jars/*.jar`
38     CLASSPATH="."
39     for jarfile in $jarfiles
40     do
41     CLASSPATH="$jarfile:$CLASSPATH"
42     done
43 jmduarteg 1152 jarfiles=`ls ../jars/uniprot/*.jar`
44     for jarfile in $jarfiles
45     do
46     CLASSPATH="$jarfile:$CLASSPATH"
47     done
48 duarte 971
49     echo $CLASSPATH
50    
51    
52 jmduarteg 1152 javac \
53     *.java \
54     owl/core/structure/*.java \
55     owl/core/sequence/*.java \
56     owl/core/util/*.java \
57     owl/core/connections/*.java \
58     owl/core/features/*.java \
59     owl/core/runners/*.java
60 duarte 496
61     # creating jar file
62 duarte 968 echo "Creating jar file: $tag.jar ..."
63     jar -cfm ../../$tag.jar ../Manifest.txt .
64 duarte 496
65 duarte 968 # removing $tag temp directory
66     cd ../..
67 duarte 972 rm -rf $tag

Properties

Name Value
svn:executable *