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r597
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Sequence.java 597 (11 years ago) by duarte: Fixed the fasta header regex to take only first token of header as sequence name (same behaviour as in Alignment class)
PsipredRunner.java 590 (11 years ago) by duarte: Added code to run psipred. Fixed a few minor bugs.
PsipredError.java 590 (11 years ago) by duarte: Added code to run psipred. Fixed a few minor bugs.
BlastUtils.java 593 (11 years ago) by stehr: merged in some changes (now writing similarity matrix in blast utils)
BlastTabularParser.java 577 (11 years ago) by duarte: New package sequence. Initial commit of classes to run blast and parse its output.
BlastRunner.java 593 (11 years ago) by stehr: merged in some changes (now writing similarity matrix in blast utils)
BlastHitList.java 589 (11 years ago) by duarte: New classes Template, TemplateList to be used in homology modelling pipeline. Modified BlastUtils to use TemplateList class
BlastHit.java 589 (11 years ago) by duarte: New classes Template, TemplateList to be used in homology modelling pipeline. Modified BlastUtils to use TemplateList class
BlastError.java 577 (11 years ago) by duarte: New package sequence. Initial commit of classes to run blast and parse its output.
(Current path doesn't exist after revision 950)
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