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r1064
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casp/ 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
core/ 1062 (9 years ago) by stehr: fixed a minor bug in JPredConnection; new method SecondaryStructure.getConsensusSecondaryStructure(); changed visibility of RIGEnsemble.addFile() to public
decoyScoring/ 1059 (9 years ago) by jmduarteg: Fixed java doc
deltaRank/ 1057 (9 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
embed/ 1018 (10 years ago) by hstehr: removing a warning in owl.embed.contactmaps.Demes
gmbp/ 1058 (9 years ago) by cvehlow: Load from zip-file!
graphAveraging/ 1064 (9 years ago) by hstehr: fixed a bug in GraphAverager.getGraphWithTopContacts() which caused a null pointer exception in jung.SparseGraph.addEdge(), this may even be a bug in jung
litNet/ 1007 (10 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
ppi/ 1007 (10 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
sadp/ 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
tests/ 1042 (9 years ago) by jmduarteg: New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
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