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r1061
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litNet/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
ppi/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
sadp/ 1009 (9 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
casp/ 1009 (9 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
embed/ 1018 (9 years ago) by hstehr: removing a warning in owl.embed.contactmaps.Demes
tests/ 1042 (9 years ago) by jmduarteg: New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
graphAveraging/ 1047 (9 years ago) by jmduarteg: SecondaryStructure now implements Iterable after refactoring of getIterator
deltaRank/ 1057 (9 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
gmbp/ 1058 (9 years ago) by cvehlow: Load from zip-file!
decoyScoring/ 1059 (9 years ago) by jmduarteg: Fixed java doc
core/ 1061 (9 years ago) by hstehr: Adding the possibility to set the timeout for a JPredConnection. Next step is to add this as a user variable to CMView
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