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r1177
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litNet/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
ppi/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
embed/ 1018 (9 years ago) by hstehr: removing a warning in owl.embed.contactmaps.Demes
deltaRank/ 1057 (9 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
decoyScoring/ 1059 (9 years ago) by jmduarteg: Fixed java doc
sadp/ 1084 (9 years ago) by matt4077: renamed conflicting ContactMap class.
graphAveraging/ 1170 (9 years ago) by hstehr: adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
casp/ 1173 (9 years ago) by hstehr: minor modifications to casp benchmarking script
gmbp/ 1175 (9 years ago) by cvehlow: Method to get translated and rotated coordinates.
tests/ 1176 (9 years ago) by jmduarteg: Now parsing the occupancy and bfactors from pdbfile, ciffile or pdbase. Tests passed (improved tests so that they can run straight from an pdb ftp mirror with gz files).
core/ 1177 (9 years ago) by cvehlow: actual version
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