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r1215
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litNet/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
ppi/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
deltaRank/ 1057 (9 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
sadp/ 1084 (9 years ago) by matt4077: renamed conflicting ContactMap class.
graphAveraging/ 1170 (9 years ago) by hstehr: adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
embed/ 1202 (9 years ago) by hstehr: suppress "method not used" warning
tests/ 1208 (9 years ago) by cvehlow: Scoring:KendallsTau-method added to Statistics
casp/ 1208 (9 years ago) by cvehlow: Scoring:KendallsTau-method added to Statistics
decoyScoring/ 1208 (9 years ago) by cvehlow: Scoring:KendallsTau-method added to Statistics
gmbp/ 1210 (9 years ago) by cvehlow: Changes to select certain Secondary Structure Type for Traces extraction!
core/ 1215 (9 years ago) by jmduarteg: Fixed bug: using the negative side of the 26 translations was causing an incorrect number of interfaces reported for 1pmm and 1pmo. Not sure why but for the moment reverting to doing the positive side. Changed cutoff to 5.9, then both 1pmm and 1pmo match pisa. Better reporting of symops (now based on matrices converted to algebraic notation), before was not totally correct. Still problems with the code as it does not match pisa for some examples (probably many), e.g. for 7odc reports 4 instead of 6 interfaces.
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