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r1231
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litNet/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
ppi/ 1007 (9 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
deltaRank/ 1057 (9 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
sadp/ 1084 (9 years ago) by matt4077: renamed conflicting ContactMap class.
graphAveraging/ 1170 (9 years ago) by hstehr: adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
decoyScoring/ 1208 (9 years ago) by cvehlow: Scoring:KendallsTau-method added to Statistics
casp/ 1223 (9 years ago) by hstehr: updated classes for evaluating our CASP predictions
gmbp/ 1224 (9 years ago) by cvehlow: added methods
embed/ 1227 (9 years ago) by gmueller: new methods added -method, takes care of row and column index maps (refreshMatrix()) -methods, adding or removing entries, without refreshing index mapping -norm methods(norm1(), norm2(), normInf()) as well as a special innerProduct() method
tests/ 1230 (9 years ago) by jmduarteg: Fixed bug: bsa values were wrongly calculated. Now sort of interfaces is always descending. Some more testing for individual residues asa and bsa values. Still an issue: individual bsas are not matching pisa's even though total interface areas are fine.
core/ 1231 (9 years ago) by hstehr: Adding class PhosphoSiteConnection
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