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r1069
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tests/ 1042 (10 years ago) by jmduarteg: New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
sadp/ 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
ppi/ 1007 (10 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
litNet/ 1007 (10 years ago) by hstehr: refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
graphAveraging/ 1066 (10 years ago) by hstehr: new methods needed for CCCP: RIGraph.addEdgeIJ(i,j,weight), RIGEnsembl.loadFromDirectory(), GraphAverager.addZeroEdges(), SecondaryStructure.print()
gmbp/ 1068 (10 years ago) by cvehlow: HandOverThetaPhiRanges
embed/ 1018 (10 years ago) by hstehr: removing a warning in owl.embed.contactmaps.Demes
deltaRank/ 1057 (10 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
decoyScoring/ 1059 (10 years ago) by jmduarteg: Fixed java doc
core/ 1069 (10 years ago) by jmduarteg: New methods to retrieve uniprot data and embl cds for a single homolog
casp/ 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
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