 ../
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tests/
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1042
(10 years ago)
by jmduarteg:
New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
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sadp/
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1084
(10 years ago)
by matt4077:
renamed conflicting ContactMap class.
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ppi/
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1007
(10 years ago)
by hstehr:
refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
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litNet/
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1007
(10 years ago)
by hstehr:
refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
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graphAveraging/
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1170
(10 years ago)
by hstehr:
adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
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gmbp/
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1175
(10 years ago)
by cvehlow:
Method to get translated and rotated coordinates.
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embed/
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1018
(10 years ago)
by hstehr:
removing a warning in owl.embed.contactmaps.Demes
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deltaRank/
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1057
(10 years ago)
by matt4077:
add psi/phi constraints from secondary structure to tinker reconstructions
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decoyScoring/
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1059
(10 years ago)
by jmduarteg:
Fixed java doc
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core/
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1175
(10 years ago)
by cvehlow:
Method to get translated and rotated coordinates.
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casp/
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1173
(10 years ago)
by hstehr:
minor modifications to casp benchmarking script
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